Dr Guillaume Charbonnier

Quality Control

Quality control of your high-throughput sequencing data and reporting using MultiQC to gather up to 78 bioinformatics tools in a single html report.

Close Window

Chromatin segmentation

Chromatin segmentation and annotation based on your available epigenetic marks. Tailor-made feature extraction and data visualization to answer your biological questions.

Close Window

Clustering, heatmaps and metaprofiles

Clustering of your heterogeneous dataset and selection of the best composite representation to convey your key message.

Close Window

Differential analysis

Differential expression analysis from RNA-Seq data and differential chromatin state from ChIP-Seq, ATAC-Seq and Bisulfite-Seq data.

Close Window

Enrichment analysis

Gene ontology and pathway enrichment analyses from extracted gene lists or distal cis-regulatory regions.

Close Window

SNV and Indel detection

Single nucleotide variant and indel detection using a broad range of state-of-the-art algorithms.

Close Window